org.opentox.toxotis.core.component
Class DummyComponent

java.lang.Object
  extended by org.opentox.toxotis.core.OTComponent<DummyComponent>
      extended by org.opentox.toxotis.core.component.DummyComponent
All Implemented Interfaces:
Serializable, IOTComponent, IStAXWritable

public class DummyComponent
extends OTComponent<DummyComponent>

A minimal implementaiton of a component with just a URI and a set of ontological classes and not much functionality therein.

Author:
Pantelis Sopasakis, Charalampos Chomenides
See Also:
Serialized Form

Field Summary
 
Fields inherited from class org.opentox.toxotis.core.OTComponent
meta, RDF_ABOUT, RDF_RDF, RDF_RESOURCE, RDF_TYPE
 
Constructor Summary
DummyComponent()
          Dummy constructor for this component with no arguments.
DummyComponent(VRI uri)
           
 
Method Summary
 com.hp.hpl.jena.ontology.Individual asIndividual(com.hp.hpl.jena.ontology.OntModel om)
          The OpenTox component as an individual.
 void writeRdf(XMLStreamWriter writer)
          Due to the large size of some objects like datasets, it is advisable to use this method for serializing large objects to RDF/XML rather than the method OntModel#write(OutputStream).
 
Methods inherited from class org.opentox.toxotis.core.OTComponent
addOntologicalClasses, asOntModel, endRdfWriter, equals, getMeta, getOntologicalClasses, getUri, hashCode, initRdfWriter, isEnabled, setEnabled, setMeta, setOntologicalClasses, setUri, writeAnnotationProperty, writeClass, writeDatatypeProperty, writeMetaDataProperties, writeObjectProperty, writeRdf, writeRdf, writeSuperClassRelationships
 
Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

DummyComponent

public DummyComponent()
Dummy constructor for this component with no arguments. Calls the contructor in the super class and initializes the ontological classes for it with OTClasses#OpenToxResource()


DummyComponent

public DummyComponent(VRI uri)
Method Detail

asIndividual

public com.hp.hpl.jena.ontology.Individual asIndividual(com.hp.hpl.jena.ontology.OntModel om)
Description copied from interface: IOTComponent
The OpenTox component as an individual.

Parameters:
om - The ontological model to which the individual belongs.
Returns:
The OpenTox component as an individual of a data model.

writeRdf

public void writeRdf(XMLStreamWriter writer)
              throws XMLStreamException
Description copied from interface: IStAXWritable
Due to the large size of some objects like datasets, it is advisable to use this method for serializing large objects to RDF/XML rather than the method OntModel#write(OutputStream). In the case of Datasets, it has been shown that this method performs much faster (about 7,5 times faster on a dataset of 21 features and 1000 compounds).

Parameters:
writer - XML Stream Writer used for the serialization of the dataset object.
Throws:
XMLStreamException - In case the serialization is not possible due to syntax errors.


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